1. motifbreakR::encodemotif
    MotifDb object containing motif information from the known and discovered motifs for the ENCODE TF ChIP-seq datasets.
    rda| rds
    MotifList
  2. motifbreakR::example.pvalue
    json| rda| rds
  3. motifbreakR::example.results
    Example Results from motifbreakR
    rda| rds
    GRanges
  4. motifbreakR::factorbook
    MotifDb object containing motif information from around the genomic regions bound by 119 human transcription factors in Factorbook.
    rda| rds
    MotifList
  5. motifbreakR::hocomoco
    MotifDb object containing motif information from Homo Sapiens Comprehensive Model Collection (HOCOMOCO) of transcription factor (TF) binding models
    rda| rds
    MotifList
  6. motifbreakR::homer
    MotifDb object containing motif information from motif databases included in HOMER.
    rda| rds
    MotifList
  7. motifbreakR::motifbreakR_motif
    MotifDb object containing motif information from the motif databases of HOCOMOCO, Homer, FactorBook and ENCODE
    rda| rds
    MotifList